J4_9PJ9_001

3D structure

PDB id

9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Minocycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ9|1|A|G|115
9PJ9|1|A|A|116
9PJ9|1|A|G|117
9PJ9|1|A|U|118
9PJ9|1|A|A|119
9PJ9|1|A|A|120
9PJ9|1|A|C|121
9PJ9|1|A|A|122
9PJ9|1|A|C|123
*
9PJ9|1|A|G|240
9PJ9|1|A|G|241
9PJ9|1|A|C|242
*
9PJ9|1|A|G|288
9PJ9|1|A|U|289
9PJ9|1|A|A|290
9PJ9|1|A|G|291
*
9PJ9|1|A|C|313
9PJ9|1|A|C|314

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain Q

30S ribosomal protein S17