J4_9PJ9_002

3D structure

PDB id

9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Minocycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UU*GAUAGGA*UGGAAAG*CG

Length

18 nucleotides

Bulged bases

9PJ9|1|A|G|184

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ9|1|A|U|144
9PJ9|1|A|U|145
*
9PJ9|1|A|G|179
9PJ9|1|A|A|180
9PJ9|1|A|U|181
9PJ9|1|A|A|182
9PJ9|1|A|G|183
9PJ9|1|A|G|184
9PJ9|1|A|A|185
*
9PJ9|1|A|U|208
9PJ9|1|A|G|209
9PJ9|1|A|G|210
9PJ9|1|A|A|211
9PJ9|1|A|A|212
9PJ9|1|A|A|213
9PJ9|1|A|G|214
*
9PJ9|1|A|C|221
9PJ9|1|A|G|222

Current chains

Chain A

16S rRNA

Nearby chains

Chain Q

30S ribosomal protein S17

Chain T

30S ribosomal protein S20