J4_9PJ9_005

3D structure

PDB id

9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Minocycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUAAAC*GGGUUG*CUG*CAAG

Length

19 nucleotides

Bulged bases

9PJ9|1|a|U|322, 9PJ9|1|a|U|494

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ9|1|a|C|275
9PJ9|1|a|U|276
9PJ9|1|a|A|277
9PJ9|1|a|A|278
9PJ9|1|a|A|279
9PJ9|1|a|C|280
*
9PJ9|1|a|G|318
9PJ9|1|a|G|319
9PJ9|1|a|G|320
9PJ9|1|a|U|321
9PJ9|1|a|U|322
9PJ9|1|a|G|323
*
9PJ9|1|a|C|493
9PJ9|1|a|U|494
9PJ9|1|a|G|495
*
9PJ9|1|a|C|510
9PJ9|1|a|A|511
9PJ9|1|a|A|512
9PJ9|1|a|G|513

Current chains

Chain a

23S rRNA

Nearby chains