J4_9PRA_004

3D structure

PDB id

9PRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CUG*CC*GCAAAGGUAG*UGAAUG

Length

21 nucleotides

Bulged bases

9PRA|1|A|U|2634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRA|1|A|C|2544
9PRA|1|A|U|2545
9PRA|1|A|G|2546
*
9PRA|1|A|C|2569
9PRA|1|A|C|2570
*
9PRA|1|A|G|2587
9PRA|1|A|C|2588
9PRA|1|A|A|2589
9PRA|1|A|A|2590
9PRA|1|A|A|2591
9PRA|1|A|G|2592
9PRA|1|A|G|2593
9PRA|1|A|U|2594
9PRA|1|A|A|2595
9PRA|1|A|G|2596
*
9PRA|1|A|U|2630
9PRA|1|A|G|2631
9PRA|1|A|A|2632
9PRA|1|A|A|2633
9PRA|1|A|U|2634
9PRA|1|A|G|2635

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial