J4_9PRD_004
3D structure
- PDB id
- 9PRD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CUG*CC*GCAAAGGUAG*UGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 9PRD|1|A|U|2634
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PRD|1|A|C|2544
9PRD|1|A|U|2545
9PRD|1|A|G|2546
*
9PRD|1|A|C|2569
9PRD|1|A|C|2570
*
9PRD|1|A|G|2587
9PRD|1|A|C|2588
9PRD|1|A|A|2589
9PRD|1|A|A|2590
9PRD|1|A|A|2591
9PRD|1|A|G|2592
9PRD|1|A|G|2593
9PRD|1|A|U|2594
9PRD|1|A|A|2595
9PRD|1|A|G|2596
*
9PRD|1|A|U|2630
9PRD|1|A|G|2631
9PRD|1|A|A|2632
9PRD|1|A|A|2633
9PRD|1|A|U|2634
9PRD|1|A|G|2635
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain A3
- Aurora kinase A-interacting protein
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain Ax
- P/P-tRNA
- Chain D
- 39S ribosomal protein L2, mitochondrial
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