J4_9PRQ_001

3D structure

PDB id

9PRQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

CAUG*CU*AAAG*CAG

Length

13 nucleotides

Bulged bases

9PRQ|1|A|U|2316, 9PRQ|1|A|A|2452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRQ|1|A|C|2314
9PRQ|1|A|A|2315
9PRQ|1|A|U|2316
9PRQ|1|A|G|2317
*
9PRQ|1|A|C|2326
9PRQ|1|A|U|2327
*
9PRQ|1|A|A|2450
9PRQ|1|A|A|2451
9PRQ|1|A|A|2452
9PRQ|1|A|G|2453
*
9PRQ|1|A|C|2671
9PRQ|1|A|A|2672
9PRQ|1|A|G|2673

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain O

39S ribosomal protein L17, mitochondrial

Chain T

39S ribosomal protein L22, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial