J4_9PS0_007

3D structure

PDB id

9PS0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/P-P/E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

GAGUUCAC*GACA*UAG*CC

Length

17 nucleotides

Bulged bases

9PS0|1|AA|C|722

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PS0|1|AA|G|717
9PS0|1|AA|A|718
9PS0|1|AA|G|719
9PS0|1|AA|U|720
9PS0|1|AA|U|721
9PS0|1|AA|C|722
9PS0|1|AA|A|723
9PS0|1|AA|C|724
*
9PS0|1|AA|G|750
9PS0|1|AA|A|751
9PS0|1|AA|C|752
9PS0|1|AA|A|753
*
9PS0|1|AA|U|789
9PS0|1|AA|A|790
9PS0|1|AA|G|791
*
9PS0|1|AA|C|797
9PS0|1|AA|C|798

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

Small ribosomal subunit protein mS34

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AN

28S ribosomal protein S17, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial