J4_9PS7_010
3D structure
- PDB id
- 9PS7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A/T-P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- GUCA*UAU*AAAAUG*CC
- Length
- 15 nucleotides
- Bulged bases
- 9PS7|1|Ax|U|8, 9PS7|1|Ax|U|44
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PS7|1|Ax|G|7
9PS7|1|Ax|U|8
9PS7|1|Ax|C|9
9PS7|1|Ax|A|10
*
9PS7|1|Ax|U|22
9PS7|1|Ax|A|23
9PS7|1|Ax|U|24
*
9PS7|1|Ax|A|40
9PS7|1|Ax|A|41
9PS7|1|Ax|A|42
9PS7|1|Ax|A|43
9PS7|1|Ax|U|44
9PS7|1|Ax|G|45
*
9PS7|1|Ax|C|60
9PS7|1|Ax|C|61
Current chains
- Chain Ax
- P/P-tRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
Coloring options: