J4_9PZG_001

3D structure

PDB id

9PZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GAGUAAUG*UG*CUAG*CC

Length

16 nucleotides

Bulged bases

9PZG|1|A|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PZG|1|A|G|115
9PZG|1|A|A|116
9PZG|1|A|G|117
9PZG|1|A|U|118
9PZG|1|A|A|119
9PZG|1|A|A|120
9PZG|1|A|U|121
9PZG|1|A|G|122
*
9PZG|1|A|U|239
9PZG|1|A|G|240
*
9PZG|1|A|C|286
9PZG|1|A|U|287
9PZG|1|A|A|288
9PZG|1|A|G|289
*
9PZG|1|A|C|311
9PZG|1|A|C|312

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain Q

Small ribosomal subunit protein uS17