J4_9Q2P_008
3D structure
- PDB id
- 9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AGAUG*CAGUG*CGACC*GAGGGUGUAAAU
- Length
- 27 nucleotides
- Bulged bases
- 9Q2P|1|5|U|2763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2P|1|5|A|2551
9Q2P|1|5|G|2552
9Q2P|1|5|A|2553
9Q2P|1|5|U|2554
9Q2P|1|5|G|2555
*
9Q2P|1|5|C|2572
9Q2P|1|5|A|2573
9Q2P|1|5|G|2574
9Q2P|1|5|U|2575
9Q2P|1|5|G|2576
*
9Q2P|1|5|C|2585
9Q2P|1|5|G|2586
9Q2P|1|5|A|2587
9Q2P|1|5|C|2588
9Q2P|1|5|C|2589
*
9Q2P|1|5|G|2756
9Q2P|1|5|A|2757
9Q2P|1|5|G|2758
9Q2P|1|5|G|2759
9Q2P|1|5|G|2760
9Q2P|1|5|U|2761
9Q2P|1|5|G|2762
9Q2P|1|5|U|2763
9Q2P|1|5|A|2764
9Q2P|1|5|A|2765
9Q2P|1|5|A|2766
9Q2P|1|5|U|2767
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain Z
- 60S ribosomal protein L27
- Chain g
- 60S ribosomal protein L34
Coloring options: