J4_9Q6T_025

3D structure

PDB id

9Q6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin and protein Y at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q6T|1|2a|G|142
9Q6T|1|2a|A|143
9Q6T|1|2a|G|144
*
9Q6T|1|2a|C|178
9Q6T|1|2a|A|179
9Q6T|1|2a|U|180
9Q6T|1|2a|G|181
9Q6T|1|2a|U|182
9Q6T|1|2a|G|183
*
9Q6T|1|2a|C|194
9Q6T|1|2a|A|195
9Q6T|1|2a|A|196
9Q6T|1|2a|A|197
9Q6T|1|2a|G|198
*
9Q6T|1|2a|C|219
9Q6T|1|2a|G|220
9Q6T|1|2a|C|221

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2t

30S ribosomal protein S20