J4_9Q6U_012

3D structure

PDB id

9Q6U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin-26 triazole derivative and protein Y at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

9Q6U|1|1a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q6U|1|1a|G|142
9Q6U|1|1a|A|143
9Q6U|1|1a|G|144
*
9Q6U|1|1a|C|178
9Q6U|1|1a|A|179
9Q6U|1|1a|U|180
9Q6U|1|1a|G|181
9Q6U|1|1a|U|182
9Q6U|1|1a|G|183
*
9Q6U|1|1a|C|194
9Q6U|1|1a|A|195
9Q6U|1|1a|A|196
9Q6U|1|1a|A|197
9Q6U|1|1a|G|198
*
9Q6U|1|1a|C|219
9Q6U|1|1a|G|220
9Q6U|1|1a|C|221

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1t

30S ribosomal protein S20