J4_9Q7Q_002

3D structure

PDB id

9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

ABCE1-eRF1-RNC-AMD1C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

9Q7Q|1|5|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q7Q|1|5|C|111
9Q7Q|1|5|C|112
*
9Q7Q|1|5|G|278
9Q7Q|1|5|A|279
9Q7Q|1|5|G|280
9Q7Q|1|5|U|281
9Q7Q|1|5|C|282
9Q7Q|1|5|G|283
*
9Q7Q|1|5|C|304
9Q7Q|1|5|A|305
9Q7Q|1|5|A|306
9Q7Q|1|5|A|307
9Q7Q|1|5|G|308
9Q7Q|1|5|C|309
9Q7Q|1|5|G|310
*
9Q7Q|1|5|U|327
9Q7Q|1|5|A|328
9Q7Q|1|5|A|329
9Q7Q|1|5|G|330

Current chains

Chain 5

28S rRNA

Nearby chains

Chain L

Large ribosomal subunit protein eL13

Chain N

60S ribosomal protein L15

Chain h

eL35

Chain i

Large ribosomal subunit protein eL36