J4_9QEH_011

3D structure

PDB id

9QEH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.08 Å

Loop

Sequence

GAGC*GAC*GGACG*CCC

Length

15 nucleotides

Bulged bases

9QEH|1|A|A|2760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QEH|1|A|G|2670
9QEH|1|A|A|2671
9QEH|1|A|G|2672
9QEH|1|A|C|2673
*
9QEH|1|A|G|2701
9QEH|1|A|A|2702
9QEH|1|A|C|2703
*
9QEH|1|A|G|2758
9QEH|1|A|G|2759
9QEH|1|A|A|2760
9QEH|1|A|C|2761
9QEH|1|A|G|2762
*
9QEH|1|A|C|2796
9QEH|1|A|C|2797
9QEH|1|A|C|2798

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

Large ribosomal subunit protein uL3

Chain H

Large ribosomal subunit protein uL13

Chain I

Large ribosomal subunit protein uL14