J4_9QOH_008
3D structure
- PDB id
- 9QOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome POST translocation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CUG*CG*UCUUAAGGUAG*UGAA(OMU)G
- Length
- 22 nucleotides
- Bulged bases
- 9QOH|1|A2|U|3428, 9QOH|1|A2|OMU|3474
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QOH|1|A2|C|3352
9QOH|1|A2|U|3353
9QOH|1|A2|G|3354
*
9QOH|1|A2|C|3408
9QOH|1|A2|G|3409
*
9QOH|1|A2|U|3426
9QOH|1|A2|C|3427
9QOH|1|A2|U|3428
9QOH|1|A2|U|3429
9QOH|1|A2|A|3430
9QOH|1|A2|A|3431
9QOH|1|A2|G|3432
9QOH|1|A2|G|3433
9QOH|1|A2|U|3434
9QOH|1|A2|A|3435
9QOH|1|A2|G|3436
*
9QOH|1|A2|U|3470
9QOH|1|A2|G|3471
9QOH|1|A2|A|3472
9QOH|1|A2|A|3473
9QOH|1|A2|OMU|3474
9QOH|1|A2|G|3475
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain Bv
- Transfer RNA; tRNA
- Chain D2
- Large ribosomal subunit protein uL2
- Chain h2
- 60S ribosomal protein L41
- Chain m2
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: