J4_9QQP_005
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 9QQP|1|A2|C|2192
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|A2|G|2161
9QQP|1|A2|G|2162
9QQP|1|A2|U|2163
9QQP|1|A2|U|2164
9QQP|1|A2|C|2165
*
9QQP|1|A2|G|2189
9QQP|1|A2|G|2190
9QQP|1|A2|U|2191
9QQP|1|A2|C|2192
9QQP|1|A2|A|2193
9QQP|1|A2|G|2194
*
9QQP|1|A2|U|2293
9QQP|1|A2|C|2294
*
9QQP|1|A2|G|2532
9QQP|1|A2|G|2533
9QQP|1|A2|C|2534
9QQP|1|A2|C|2535
9QQP|1|A2|G|2536
9QQP|1|A2|U|2537
9QQP|1|A2|A|2538
9QQP|1|A2|C|2539
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain L2
- Large ribosomal subunit protein eL19
- Chain R2
- Large ribosomal subunit protein uL23
- Chain a2
- Large ribosomal subunit protein eL34
- Chain b2
- Large ribosomal subunit protein uL29
- Chain d2
- Large ribosomal subunit protein eL37
- Chain e2
- Large ribosomal subunit protein eL38
- Chain f2
- Large ribosomal subunit protein eL39
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