J4_9QQP_012
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- C(A2M)UUAAAUC*GCC*GUGAC*GG
- Length
- 19 nucleotides
- Bulged bases
- 9QQP|1|m2|G|409
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|m2|C|98
9QQP|1|m2|A2M|99
9QQP|1|m2|U|100
9QQP|1|m2|U|101
9QQP|1|m2|A|102
9QQP|1|m2|A|103
9QQP|1|m2|A|104
9QQP|1|m2|U|105
9QQP|1|m2|C|106
*
9QQP|1|m2|G|357
9QQP|1|m2|C|358
9QQP|1|m2|C|359
*
9QQP|1|m2|G|407
9QQP|1|m2|U|408
9QQP|1|m2|G|409
9QQP|1|m2|A|410
9QQP|1|m2|C|411
*
9QQP|1|m2|G|433
9QQP|1|m2|G|434
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain E3
- Small ribosomal subunit protein uS12
- Chain r2
- 40S ribosomal protein S4, X isoform (eS4)
- Chain u2
- Small ribosomal subunit protein eS8
- Chain w2
- Small ribosomal subunit protein uS17
Coloring options: