J4_9QWT_001

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

9QWT|1|A2|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|C|111
9QWT|1|A2|C|112
*
9QWT|1|A2|G|278
9QWT|1|A2|A|279
9QWT|1|A2|G|280
9QWT|1|A2|U|281
9QWT|1|A2|C|282
9QWT|1|A2|G|283
*
9QWT|1|A2|C|304
9QWT|1|A2|A|305
9QWT|1|A2|A|306
9QWT|1|A2|A|307
9QWT|1|A2|G|308
9QWT|1|A2|C|309
9QWT|1|A2|G|310
*
9QWT|1|A2|U|327
9QWT|1|A2|A|328
9QWT|1|A2|A|329
9QWT|1|A2|G|330

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F1

Large ribosomal subunit protein eL13

Chain H1

Large ribosomal subunit protein eL15

Chain b2

Large ribosomal subunit protein uL29

Chain c2

Large ribosomal subunit protein eL36