J4_9QZP_003

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CUC*GCCGG*CGGUCAC*GAAGCCG

Length

22 nucleotides

Bulged bases

9QZP|1|A2|G|1063, 9QZP|1|A2|C|1085, 9QZP|1|A2|C|1086

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|881
9QZP|1|A2|U|882
9QZP|1|A2|C|883
*
9QZP|1|A2|G|925
9QZP|1|A2|C|926
9QZP|1|A2|C|927
9QZP|1|A2|G|928
9QZP|1|A2|G|929
*
9QZP|1|A2|C|1062
9QZP|1|A2|G|1063
9QZP|1|A2|G|1064
9QZP|1|A2|U|1065
9QZP|1|A2|C|1066
9QZP|1|A2|A|1067
9QZP|1|A2|C|1068
*
9QZP|1|A2|G|1081
9QZP|1|A2|A|1082
9QZP|1|A2|A|1083
9QZP|1|A2|G|1084
9QZP|1|A2|C|1085
9QZP|1|A2|C|1086
9QZP|1|A2|G|1087

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A1

Large ribosomal subunit protein uL30

Chain F2

Large ribosomal subunit protein uL4

Chain H2

Large ribosomal subunit protein eL6

Chain V2

Large ribosomal subunit protein eL29