3D structure

PDB id
9RBF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a stalled E. coli 70S RNC-NuoK-86 in complex with the membrane protein insertase SecYEG-YidC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.44 Å

Loop

Sequence
GGUUC*GGUGAG*CU*AAUCGUAC
Length
21 nucleotides
Bulged bases
9RBF|1|a|G|1341
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RBF|1|a|G|1310
9RBF|1|a|G|1311
9RBF|1|a|U|1312
9RBF|1|a|U|1313
9RBF|1|a|C|1314
*
9RBF|1|a|G|1338
9RBF|1|a|G|1339
9RBF|1|a|U|1340
9RBF|1|a|G|1341
9RBF|1|a|A|1342
9RBF|1|a|G|1343
*
9RBF|1|a|C|1404
9RBF|1|a|U|1405
*
9RBF|1|a|A|1597
9RBF|1|a|A|1598
9RBF|1|a|U|1599
9RBF|1|a|C|1600
9RBF|1|a|G|1601
9RBF|1|a|U|1602
9RBF|1|a|A|1603
9RBF|1|a|C|1604

Current chains

Chain a
23S rRNA

Nearby chains

Chain 1
Large ribosomal subunit protein bL34
Chain 6
Protein translocase subunit SecY
Chain s
Large ribosomal subunit protein uL23

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