J4_9ROR_003
3D structure
- PDB id
- 9ROR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit bound to METTL15 and RBFA (Outward conformation) (State M3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- CGUAAAGAG*CAAUAG*CCCUAAACCUCA*UCG
- Length
- 30 nucleotides
- Bulged bases
- 9ROR|1|A|A|938, 9ROR|1|A|A|942, 9ROR|1|A|A|1103, 9ROR|1|A|C|1106
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9ROR|1|A|C|935
9ROR|1|A|G|936
9ROR|1|A|U|937
9ROR|1|A|A|938
9ROR|1|A|A|939
9ROR|1|A|A|940
9ROR|1|A|G|941
9ROR|1|A|A|942
9ROR|1|A|G|943
*
9ROR|1|A|C|1052
9ROR|1|A|A|1053
9ROR|1|A|A|1054
9ROR|1|A|U|1055
9ROR|1|A|A|1056
9ROR|1|A|G|1057
*
9ROR|1|A|C|1098
9ROR|1|A|C|1099
9ROR|1|A|C|1100
9ROR|1|A|U|1101
9ROR|1|A|A|1102
9ROR|1|A|A|1103
9ROR|1|A|A|1104
9ROR|1|A|C|1105
9ROR|1|A|C|1106
9ROR|1|A|U|1107
9ROR|1|A|C|1108
9ROR|1|A|A|1109
*
9ROR|1|A|U|1132
9ROR|1|A|C|1133
9ROR|1|A|G|1134
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 3
- Aurora kinase A-interacting protein
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain J
- 28S ribosomal protein S12, mitochondrial
- Chain L
- 28S ribosomal protein S15, mitochondrial
- Chain N
- 28S ribosomal protein S17, mitochondrial
- Chain Q
- MRPS21 isoform 1
- Chain T
- 28S ribosomal protein S25, mitochondrial
- Chain a
- Putative ribosome-binding factor A, mitochondrial
Coloring options: