J4_9RTV_012

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

9RTV|1|a|C|183, 9RTV|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RTV|1|a|G|142
9RTV|1|a|A|143
9RTV|1|a|G|144
9RTV|1|a|G|145
9RTV|1|a|G|146
*
9RTV|1|a|C|176
9RTV|1|a|G|177
9RTV|1|a|C|178
9RTV|1|a|A|179
9RTV|1|a|U|180
9RTV|1|a|A|181
9RTV|1|a|A|182
9RTV|1|a|C|183
9RTV|1|a|G|184
*
9RTV|1|a|C|193
9RTV|1|a|C|194
9RTV|1|a|A|195
9RTV|1|a|A|196
9RTV|1|a|A|197
9RTV|1|a|G|198
*
9RTV|1|a|U|219
9RTV|1|a|G|220
9RTV|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20