J4_9RU6_008
3D structure
- PDB id
- 9RU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitoribosome bound to TACO1 (Translational activator of COX1), mRNA, A/A-, P/P- and (partial) E/E-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- UAUAUAG*CU*AAAUU*AUUUA
- Length
- 19 nucleotides
- Bulged bases
- 9RU6|1|Aw|U|8, 9RU6|1|Aw|U|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RU6|1|Aw|U|4
9RU6|1|Aw|A|5
9RU6|1|Aw|U|6
9RU6|1|Aw|A|7
9RU6|1|Aw|U|8
9RU6|1|Aw|A|9
9RU6|1|Aw|G|10
*
9RU6|1|Aw|C|25
9RU6|1|Aw|U|26
*
9RU6|1|Aw|A|44
9RU6|1|Aw|A|45
9RU6|1|Aw|A|46
9RU6|1|Aw|U|48
9RU6|1|Aw|U|49
*
9RU6|1|Aw|A|65
9RU6|1|Aw|U|66
9RU6|1|Aw|U|67
9RU6|1|Aw|U|68
9RU6|1|Aw|A|69
Current chains
- Chain Aw
- A-site tRNA (68-MER)
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain A5
- Translational activator of cytochrome c oxidase 1
- Chain Ax
- Transfer RNA; tRNA
Coloring options: