J4_9RUA_002

3D structure

PDB id

9RUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

9RUA|1|L5|C|216, 9RUA|1|L5|C|217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUA|1|L5|C|196
9RUA|1|L5|A|197
9RUA|1|L5|A|198
9RUA|1|L5|G|199
*
9RUA|1|L5|C|215
9RUA|1|L5|C|216
9RUA|1|L5|C|217
9RUA|1|L5|A|218
9RUA|1|L5|G|219
9RUA|1|L5|C|220
9RUA|1|L5|C|221
9RUA|1|L5|C|222
*
9RUA|1|L5|G|226
9RUA|1|L5|A|227
9RUA|1|L5|C|228
*
9RUA|1|L5|G|240
9RUA|1|L5|G|241
9RUA|1|L5|U|242
9RUA|1|L5|A|243
9RUA|1|L5|G|244

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LY

Large ribosomal subunit protein uL24