J4_9S3B_002

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

9S3B|1|L5|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|L5|C|111
9S3B|1|L5|C|112
*
9S3B|1|L5|G|278
9S3B|1|L5|A|279
9S3B|1|L5|G|280
9S3B|1|L5|U|281
9S3B|1|L5|C|282
9S3B|1|L5|G|283
*
9S3B|1|L5|C|304
9S3B|1|L5|A|305
9S3B|1|L5|A|306
9S3B|1|L5|A|307
9S3B|1|L5|G|308
9S3B|1|L5|C|309
9S3B|1|L5|G|310
*
9S3B|1|L5|U|327
9S3B|1|L5|A|328
9S3B|1|L5|A|329
9S3B|1|L5|G|330

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35

Chain Li

60S ribosomal protein L36