J4_9S3B_004

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CUC*GCC*GCGC*GGAGCG

Length

16 nucleotides

Bulged bases

9S3B|1|L5|G|1271, 9S3B|1|L5|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|L5|C|981
9S3B|1|L5|U|982
9S3B|1|L5|C|983
*
9S3B|1|L5|G|1070
9S3B|1|L5|C|1071
9S3B|1|L5|C|1072
*
9S3B|1|L5|G|1240
9S3B|1|L5|C|1241
9S3B|1|L5|G|1242
9S3B|1|L5|C|1243
*
9S3B|1|L5|G|1268
9S3B|1|L5|G|1269
9S3B|1|L5|A|1270
9S3B|1|L5|G|1271
9S3B|1|L5|C|1272
9S3B|1|L5|G|1273

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain LF

Large ribosomal subunit protein uL30