J4_9S3D_003

3D structure

PDB id

9S3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC bound human RNC with 58 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CAAG*CCCAGCCC*GAC*GGUAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3D|1|L5|C|196
9S3D|1|L5|A|197
9S3D|1|L5|A|198
9S3D|1|L5|G|199
*
9S3D|1|L5|C|215
9S3D|1|L5|C|216
9S3D|1|L5|C|217
9S3D|1|L5|A|218
9S3D|1|L5|G|219
9S3D|1|L5|C|220
9S3D|1|L5|C|221
9S3D|1|L5|C|222
*
9S3D|1|L5|G|226
9S3D|1|L5|A|227
9S3D|1|L5|C|228
*
9S3D|1|L5|G|240
9S3D|1|L5|G|241
9S3D|1|L5|U|242
9S3D|1|L5|A|243
9S3D|1|L5|G|244

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LY

60S ribosomal protein L26