J4_9S7B_003

3D structure

PDB id

9S7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S7B|1|A|G|2492
9S7B|1|A|C|2493
9S7B|1|A|C|2494
9S7B|1|A|U|2495
9S7B|1|A|G|2496
*
9S7B|1|A|C|2508
9S7B|1|A|A|2509
9S7B|1|A|U|2510
9S7B|1|A|C|2511
9S7B|1|A|A|2512
9S7B|1|A|C|2513
*
9S7B|1|A|G|2537
9S7B|1|A|C|2538
9S7B|1|A|A|2539
9S7B|1|A|C|2540
9S7B|1|A|C|2541
9S7B|1|A|G|2542
*
9S7B|1|A|C|2637
9S7B|1|A|U|2638
9S7B|1|A|C|2639
9S7B|1|A|C|2640
9S7B|1|A|A|2641
9S7B|1|A|C|2642

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain A3

Small ribosomal subunit protein bS22, mitochondrial

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

Large ribosomal subunit protein uL2m