J4_9S7D_002
3D structure
- PDB id
- 9S7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UAAGCCUGCG*CAAUUAAC*GUCAACC*GCA
- Length
- 28 nucleotides
- Bulged bases
- 9S7D|1|A|U|2372, 9S7D|1|A|A|2374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9S7D|1|A|U|2336
9S7D|1|A|A|2337
9S7D|1|A|A|2338
9S7D|1|A|G|2339
9S7D|1|A|C|2340
9S7D|1|A|C|2341
9S7D|1|A|U|2342
9S7D|1|A|G|2343
9S7D|1|A|C|2344
9S7D|1|A|G|2345
*
9S7D|1|A|C|2368
9S7D|1|A|A|2369
9S7D|1|A|A|2370
9S7D|1|A|U|2371
9S7D|1|A|U|2372
9S7D|1|A|A|2373
9S7D|1|A|A|2374
9S7D|1|A|C|2375
*
9S7D|1|A|G|2421
9S7D|1|A|U|2422
9S7D|1|A|C|2423
9S7D|1|A|A|2424
9S7D|1|A|A|2425
9S7D|1|A|C|2426
9S7D|1|A|C|2427
*
9S7D|1|A|G|2436
9S7D|1|A|C|2437
9S7D|1|A|A|2438
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34m
- Chain 9
- Large ribosomal subunit protein mL41
- Chain U
- Large ribosomal subunit protein uL23m
- Chain Y
- Large ribosomal subunit protein uL29m
- Chain d
- Large ribosomal subunit protein mL45
- Chain s
- Large ribosomal subunit protein mL65
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