J4_9S7E_003

3D structure

PDB id

9S7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S7E|1|A|G|2492
9S7E|1|A|C|2493
9S7E|1|A|C|2494
9S7E|1|A|U|2495
9S7E|1|A|G|2496
*
9S7E|1|A|C|2508
9S7E|1|A|A|2509
9S7E|1|A|U|2510
9S7E|1|A|C|2511
9S7E|1|A|A|2512
9S7E|1|A|C|2513
*
9S7E|1|A|G|2537
9S7E|1|A|C|2538
9S7E|1|A|A|2539
9S7E|1|A|C|2540
9S7E|1|A|C|2541
9S7E|1|A|G|2542
*
9S7E|1|A|C|2637
9S7E|1|A|U|2638
9S7E|1|A|C|2639
9S7E|1|A|C|2640
9S7E|1|A|A|2641
9S7E|1|A|C|2642

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain A3

Small ribosomal subunit protein bS22, mitochondrial

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

Large ribosomal subunit protein uL2m