J4_9SRC_006
3D structure
- PDB id
- 9SRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- GACUG*CACAG*(4AC)GAC*GUAAC
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4AC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRC|1|1|G|2028
9SRC|1|1|A|2029
9SRC|1|1|C|2030
9SRC|1|1|U|2031
9SRC|1|1|G|2032
*
9SRC|1|1|C|2044
9SRC|1|1|A|2045
9SRC|1|1|C|2046
9SRC|1|1|A|2047
9SRC|1|1|G|2048
*
9SRC|1|1|4AC|2083
9SRC|1|1|G|2084
9SRC|1|1|A|2085
9SRC|1|1|C|2086
*
9SRC|1|1|G|2216
9SRC|1|1|U|2217
9SRC|1|1|A|2218
9SRC|1|1|A|2219
9SRC|1|1|C|2220
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain A0
- Small ribosomal subunit protein eS32
- Chain BB
- Large ribosomal subunit protein uL2
- Chain Bi
- Large ribosomal subunit protein eL43
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