J4_9SRO_002

3D structure

PDB id

9SRO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9SRO|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRO|1|A|G|142
9SRO|1|A|A|143
9SRO|1|A|G|144
*
9SRO|1|A|C|178
9SRO|1|A|A|179
9SRO|1|A|U|180
9SRO|1|A|A|181
9SRO|1|A|A|182
9SRO|1|A|C|183
9SRO|1|A|G|184
*
9SRO|1|A|C|193
9SRO|1|A|C|194
9SRO|1|A|A|195
9SRO|1|A|A|196
9SRO|1|A|A|197
9SRO|1|A|G|198
*
9SRO|1|A|U|219
9SRO|1|A|G|220
9SRO|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20