3D structure

PDB id
9T5X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
GGUUC*GGUGAG*CU*AAUCGUAC
Length
21 nucleotides
Bulged bases
9T5X|1|a|G|1341
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9T5X|1|a|G|1310
9T5X|1|a|G|1311
9T5X|1|a|U|1312
9T5X|1|a|U|1313
9T5X|1|a|C|1314
*
9T5X|1|a|G|1338
9T5X|1|a|G|1339
9T5X|1|a|U|1340
9T5X|1|a|G|1341
9T5X|1|a|A|1342
9T5X|1|a|G|1343
*
9T5X|1|a|C|1404
9T5X|1|a|U|1405
*
9T5X|1|a|A|1597
9T5X|1|a|A|1598
9T5X|1|a|U|1599
9T5X|1|a|C|1600
9T5X|1|a|G|1601
9T5X|1|a|U|1602
9T5X|1|a|A|1603
9T5X|1|a|C|1604

Current chains

Chain a
23S rRNA

Nearby chains

Chain 1
Large ribosomal subunit protein bL34
Chain 6
Protein translocase subunit SecY
Chain s
Large ribosomal subunit protein uL23

Coloring options:

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