3D structure

PDB id
9T5X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
CU(2MG)*CG*CCUAAGGUAG*CGAAUG
Length
21 nucleotides
Bulged bases
9T5X|1|a|U|1971
QA status
Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9T5X|1|a|C|1833
9T5X|1|a|U|1834
9T5X|1|a|2MG|1835
*
9T5X|1|a|C|1905
9T5X|1|a|G|1906
*
9T5X|1|a|C|1924
9T5X|1|a|C|1925
9T5X|1|a|U|1926
9T5X|1|a|A|1927
9T5X|1|a|A|1928
9T5X|1|a|G|1929
9T5X|1|a|G|1930
9T5X|1|a|U|1931
9T5X|1|a|A|1932
9T5X|1|a|G|1933
*
9T5X|1|a|C|1967
9T5X|1|a|G|1968
9T5X|1|a|A|1969
9T5X|1|a|A|1970
9T5X|1|a|U|1971
9T5X|1|a|G|1972

Current chains

Chain a
23S rRNA

Nearby chains

Chain A
Small subunit ribosomal RNA; SSU rRNA
Chain Z
Transfer RNA; tRNA
Chain c
Large ribosomal subunit protein uL2

Coloring options:

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