J4_9T61_002

3D structure

PDB id

9T61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Doxycycline Bound C. burnetii 30S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

UG*CAUAAUC*GCAAAG*UG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T61|1|A|U|140
9T61|1|A|G|141
*
9T61|1|A|C|175
9T61|1|A|A|176
9T61|1|A|U|177
9T61|1|A|A|178
9T61|1|A|A|179
9T61|1|A|U|180
9T61|1|A|C|181
*
9T61|1|A|G|190
9T61|1|A|C|191
9T61|1|A|A|192
9T61|1|A|A|193
9T61|1|A|A|194
9T61|1|A|G|195
*
9T61|1|A|U|216
9T61|1|A|G|217

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20