J4_9TEX_013

3D structure

PDB id

9TEX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dal2 bound to the Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CU(2MG)*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

9TEX|1|a|U|1971

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TEX|1|a|C|1833
9TEX|1|a|U|1834
9TEX|1|a|2MG|1835
*
9TEX|1|a|C|1905
9TEX|1|a|G|1906
*
9TEX|1|a|C|1924
9TEX|1|a|C|1925
9TEX|1|a|U|1926
9TEX|1|a|A|1927
9TEX|1|a|A|1928
9TEX|1|a|G|1929
9TEX|1|a|G|1930
9TEX|1|a|U|1931
9TEX|1|a|A|1932
9TEX|1|a|G|1933
*
9TEX|1|a|C|1967
9TEX|1|a|G|1968
9TEX|1|a|A|1969
9TEX|1|a|A|1970
9TEX|1|a|U|1971
9TEX|1|a|G|1972

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain Z

Transfer RNA; tRNA

Chain c

Large ribosomal subunit protein uL2