J4_9TEZ_009

3D structure

PDB id

9TEZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDroS bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CU(2MG)*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

9TEZ|1|V|U|1971

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TEZ|1|V|C|1833
9TEZ|1|V|U|1834
9TEZ|1|V|2MG|1835
*
9TEZ|1|V|C|1905
9TEZ|1|V|G|1906
*
9TEZ|1|V|C|1924
9TEZ|1|V|C|1925
9TEZ|1|V|U|1926
9TEZ|1|V|A|1927
9TEZ|1|V|A|1928
9TEZ|1|V|G|1929
9TEZ|1|V|G|1930
9TEZ|1|V|U|1931
9TEZ|1|V|A|1932
9TEZ|1|V|G|1933
*
9TEZ|1|V|C|1967
9TEZ|1|V|G|1968
9TEZ|1|V|A|1969
9TEZ|1|V|A|1970
9TEZ|1|V|U|1971
9TEZ|1|V|G|1972

Current chains

Chain V

23S rRNA

Nearby chains

Chain Z

Transfer RNA; tRNA

Chain c

Large ribosomal subunit protein uL2