J4_9TI5_011

3D structure

PDB id

9TI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GAGC*GAC*GGACG*CCC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TI5|1|A|G|2670
9TI5|1|A|A|2671
9TI5|1|A|G|2672
9TI5|1|A|C|2673
*
9TI5|1|A|G|2701
9TI5|1|A|A|2702
9TI5|1|A|C|2703
*
9TI5|1|A|G|2758
9TI5|1|A|G|2759
9TI5|1|A|A|2760
9TI5|1|A|C|2761
9TI5|1|A|G|2762
*
9TI5|1|A|C|2796
9TI5|1|A|C|2797
9TI5|1|A|C|2798

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L3

Chain M

50S ribosomal protein L13

Chain N

50S ribosomal protein L14