J4_9TI6_005

3D structure

PDB id

9TI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.62 Å

Loop

Sequence

GUUUC*GGUUAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

9TI6|1|A|U|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TI6|1|A|G|1347
9TI6|1|A|U|1348
9TI6|1|A|U|1349
9TI6|1|A|U|1350
9TI6|1|A|C|1351
*
9TI6|1|A|G|1375
9TI6|1|A|G|1376
9TI6|1|A|U|1377
9TI6|1|A|U|1378
9TI6|1|A|A|1379
9TI6|1|A|G|1380
*
9TI6|1|A|C|1441
9TI6|1|A|C|1442
*
9TI6|1|A|G|1641
9TI6|1|A|C|1642
9TI6|1|A|C|1643
9TI6|1|A|C|1644
9TI6|1|A|G|1645
9TI6|1|A|U|1646
9TI6|1|A|A|1647
9TI6|1|A|C|1648

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L34

Chain W

50S ribosomal protein L23