J4_9TI7_003

3D structure

PDB id

9TI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CAAG*CGUAG*CGAG*CGUUUAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TI7|1|A|C|644
9TI7|1|A|A|645
9TI7|1|A|A|646
9TI7|1|A|G|647
*
9TI7|1|A|C|669
9TI7|1|A|G|670
9TI7|1|A|U|671
9TI7|1|A|A|672
9TI7|1|A|G|673
*
9TI7|1|A|C|680
9TI7|1|A|G|681
9TI7|1|A|A|682
9TI7|1|A|G|683
*
9TI7|1|A|C|695
9TI7|1|A|G|696
9TI7|1|A|U|697
9TI7|1|A|U|698
9TI7|1|A|U|699
9TI7|1|A|A|700
9TI7|1|A|G|701

Current chains

Chain A

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L35

Chain I

50S ribosomal protein L4

Chain O

50S ribosomal protein L15