J4_9TI7_005

3D structure

PDB id

9TI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GUUUC*GGUUAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

9TI7|1|A|U|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TI7|1|A|G|1347
9TI7|1|A|U|1348
9TI7|1|A|U|1349
9TI7|1|A|U|1350
9TI7|1|A|C|1351
*
9TI7|1|A|G|1375
9TI7|1|A|G|1376
9TI7|1|A|U|1377
9TI7|1|A|U|1378
9TI7|1|A|A|1379
9TI7|1|A|G|1380
*
9TI7|1|A|C|1441
9TI7|1|A|C|1442
*
9TI7|1|A|G|1641
9TI7|1|A|C|1642
9TI7|1|A|C|1643
9TI7|1|A|C|1644
9TI7|1|A|G|1645
9TI7|1|A|U|1646
9TI7|1|A|A|1647
9TI7|1|A|C|1648

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L34

Chain W

50S ribosomal protein L23