J4_9TI8_003

3D structure

PDB id

9TI8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.18 Å

Loop

Sequence

CAAG*CGUAG*CGAG*CGUUUAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TI8|1|A|C|644
9TI8|1|A|A|645
9TI8|1|A|A|646
9TI8|1|A|G|647
*
9TI8|1|A|C|669
9TI8|1|A|G|670
9TI8|1|A|U|671
9TI8|1|A|A|672
9TI8|1|A|G|673
*
9TI8|1|A|C|680
9TI8|1|A|G|681
9TI8|1|A|A|682
9TI8|1|A|G|683
*
9TI8|1|A|C|695
9TI8|1|A|G|696
9TI8|1|A|U|697
9TI8|1|A|U|698
9TI8|1|A|U|699
9TI8|1|A|A|700
9TI8|1|A|G|701

Current chains

Chain A

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L35

Chain I

50S ribosomal protein L4

Chain O

50S ribosomal protein L15