J4_9TKP_004

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CC*GAGUAG*UGAAUAUG*CAAG

Length

20 nucleotides

Bulged bases

9TKP|1|D2|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|C|268
9TKP|1|D2|C|269
*
9TKP|1|D2|G|370
9TKP|1|D2|A|371
9TKP|1|D2|G|372
9TKP|1|D2|U|373
9TKP|1|D2|A|374
9TKP|1|D2|G|375
*
9TKP|1|D2|U|399
9TKP|1|D2|G|400
9TKP|1|D2|A|401
9TKP|1|D2|A|402
9TKP|1|D2|U|403
9TKP|1|D2|A|404
9TKP|1|D2|U|405
9TKP|1|D2|G|406
*
9TKP|1|D2|C|421
9TKP|1|D2|A|422
9TKP|1|D2|A|423
9TKP|1|D2|G|424

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B1

Large ribosomal subunit protein bL28

Chain BI

Large ribosomal subunit protein bL9