J4_9TKP_008

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UC*GGUGAG*CU*AAUCGUA

Length

17 nucleotides

Bulged bases

9TKP|1|D2|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|U|1313
9TKP|1|D2|C|1314
*
9TKP|1|D2|G|1338
9TKP|1|D2|G|1339
9TKP|1|D2|U|1340
9TKP|1|D2|G|1341
9TKP|1|D2|A|1342
9TKP|1|D2|G|1343
*
9TKP|1|D2|C|1404
9TKP|1|D2|U|1405
*
9TKP|1|D2|A|1597
9TKP|1|D2|A|1598
9TKP|1|D2|U|1599
9TKP|1|D2|C|1600
9TKP|1|D2|G|1601
9TKP|1|D2|U|1602
9TKP|1|D2|A|1603

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BW

Large ribosomal subunit protein uL23