J4_9TKP_010

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AACUG*CACAG*UGAC*GUAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|A|1772
9TKP|1|D2|A|1773
9TKP|1|D2|C|1774
9TKP|1|D2|U|1775
9TKP|1|D2|G|1776
*
9TKP|1|D2|C|1788
9TKP|1|D2|A|1789
9TKP|1|D2|C|1790
9TKP|1|D2|A|1791
9TKP|1|D2|G|1792
*
9TKP|1|D2|U|1827
9TKP|1|D2|G|1828
9TKP|1|D2|A|1829
9TKP|1|D2|C|1830
*
9TKP|1|D2|G|1975
9TKP|1|D2|U|1976
9TKP|1|D2|A|1977
9TKP|1|D2|A|1978
9TKP|1|D2|U|1979

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL2