J4_9TKP_011

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUG*CG*CCUAAGGUAG*CGAAUG

Length

21 nucleotides

Bulged bases

9TKP|1|D2|U|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|C|1833
9TKP|1|D2|U|1834
9TKP|1|D2|G|1835
*
9TKP|1|D2|C|1905
9TKP|1|D2|G|1906
*
9TKP|1|D2|C|1924
9TKP|1|D2|C|1925
9TKP|1|D2|U|1926
9TKP|1|D2|A|1927
9TKP|1|D2|A|1928
9TKP|1|D2|G|1929
9TKP|1|D2|G|1930
9TKP|1|D2|U|1931
9TKP|1|D2|A|1932
9TKP|1|D2|G|1933
*
9TKP|1|D2|C|1967
9TKP|1|D2|G|1968
9TKP|1|D2|A|1969
9TKP|1|D2|A|1970
9TKP|1|D2|U|1971
9TKP|1|D2|G|1972

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL2

Chain D1

Small subunit ribosomal RNA; SSU rRNA

Chain D5

Transfer RNA; tRNA