J4_9TKP_013

3D structure

PDB id

9TKP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Initiation Complex with extended IF2 bound (70S IC-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGGC*GAC*GGAAG*UGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKP|1|D2|G|2643
9TKP|1|D2|G|2644
9TKP|1|D2|G|2645
9TKP|1|D2|C|2646
*
9TKP|1|D2|G|2674
9TKP|1|D2|A|2675
9TKP|1|D2|C|2676
*
9TKP|1|D2|G|2731
9TKP|1|D2|G|2732
9TKP|1|D2|A|2733
9TKP|1|D2|A|2734
9TKP|1|D2|G|2735
*
9TKP|1|D2|U|2769
9TKP|1|D2|G|2770
9TKP|1|D2|C|2771

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L3

Chain BM

Large ribosomal subunit protein uL13

Chain BN

Large ribosomal subunit protein uL14