J4_9TKQ_012
3D structure
- PDB id
- 9TKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAG*UUGAC*GGU*AGG
- Length
- 16 nucleotides
- Bulged bases
- 9TKQ|1|D2|A|2288
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKQ|1|D2|C|2285
9TKQ|1|D2|G|2286
9TKQ|1|D2|A|2287
9TKQ|1|D2|A|2288
9TKQ|1|D2|G|2289
*
9TKQ|1|D2|U|2343
9TKQ|1|D2|U|2344
9TKQ|1|D2|G|2345
9TKQ|1|D2|A|2346
9TKQ|1|D2|C|2347
*
9TKQ|1|D2|G|2370
9TKQ|1|D2|G|2371
9TKQ|1|D2|U|2372
*
9TKQ|1|D2|A|2381
9TKQ|1|D2|G|2382
9TKQ|1|D2|G|2383
Current chains
- Chain D2
- 23S Ribosomal RNA
Nearby chains
- Chain B0
- Large ribosomal subunit protein bL27
- Chain B6
- Large ribosomal subunit protein bL33
- Chain B8
- Large ribosomal subunit protein bL35
- Chain BR
- Large ribosomal subunit protein uL18
Coloring options: