J4_9TT7_004
3D structure
- PDB id
- 9TT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome of WT EBV infected human B-cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 9TT7|1|L5|C|2427
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TT7|1|L5|G|2396
9TT7|1|L5|G|2397
9TT7|1|L5|U|2398
9TT7|1|L5|U|2399
9TT7|1|L5|C|2400
*
9TT7|1|L5|G|2424
9TT7|1|L5|G|2425
9TT7|1|L5|U|2426
9TT7|1|L5|C|2427
9TT7|1|L5|A|2428
9TT7|1|L5|G|2429
*
9TT7|1|L5|U|2528
9TT7|1|L5|C|2529
*
9TT7|1|L5|G|2767
9TT7|1|L5|G|2768
9TT7|1|L5|C|2769
9TT7|1|L5|C|2770
9TT7|1|L5|G|2771
9TT7|1|L5|U|2772
9TT7|1|L5|A|2773
9TT7|1|L5|C|2774
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LR
- 60S ribosomal protein L19
- Chain LX
- 60S ribosomal protein L23a
- Chain Lg
- 60S ribosomal protein L34
- Chain Lh
- 60S ribosomal protein L35
- Chain Lj
- Large ribosomal subunit protein eL37
- Chain Lk
- 60S ribosomal protein L38
- Chain Ll
- 60S ribosomal protein L39
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