J4_9TV2_006
3D structure
- PDB id
- 9TV2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- GG*UGUGAA*UGGAAAG*UC
- Length
- 17 nucleotides
- Bulged bases
- 9TV2|1|L5|A|2686
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TV2|1|L5|G|2608
9TV2|1|L5|G|2609
*
9TV2|1|L5|U|2627
9TV2|1|L5|G|2628
9TV2|1|L5|U|2629
9TV2|1|L5|G|2630
9TV2|1|L5|A|2631
9TV2|1|L5|A|2632
*
9TV2|1|L5|U|2682
9TV2|1|L5|G|2683
9TV2|1|L5|G|2684
9TV2|1|L5|A|2685
9TV2|1|L5|A|2686
9TV2|1|L5|A|2687
9TV2|1|L5|G|2688
*
9TV2|1|L5|U|2708
9TV2|1|L5|C|2709
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain LU
- 60S ribosomal protein L22
- Chain Lg
- 60S ribosomal protein L34
- Chain Lk
- 60S ribosomal protein L38
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